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The Directorate General of Taxes applies cross-equalization methods to test Value-Added Tax compliance and Income Tax withholding in an integrated manner. Tax auditors reconcile the taxable base in Input Tax Invoices with the reporting of Income Tax withholding receipts. The authority identifies the crediting of Input VAT without the reporting of the related Income Tax withholding as a strong indication of taxpayer non-compliance. The authorized institution will issue an Underpayment Tax Assessment Notice if the taxpayer fails to legally clarify the discrepancy found. Taxpayers must integrate payment procedures and routinely review tax invoices to mitigate the risk of audit sanctions..
In the modern tax audit architecture in Indonesia, as reinforced in Minister of Finance Regulation Number 15 of 2025 regarding Tax Audit Procedures, the audit approach is no longer conducted in silos. Tax Auditors now apply a fully integrated "All Taxes" testing approach. One of the most sophisticated and lethal testing methods for Taxpayers with disorderly administration is Cross-Equalization.
This article will comprehensively dissect the technical procedure of equalization between the Tax Base (DPP) of Income Tax Article 21, 23, 4 paragraph (2), and 26 with the Tax Base (DPP) of Input VAT and VAT on Offshore Services (PPN JLN) credited/paid in the Periodic VAT Return cumulatively for one tax year. This discussion refers to SE-65/PJ/2013 on Guidelines for the Use of Audit Methods and Techniques, as well as internal technical modules of the Directorate General of Taxes (DGT).
This equalization is based on the logic of the close transactional relationship between the consumption of Services/Rentals and the tax withholding obligation.
If a Taxpayer credits Input VAT on services (claiming expenses) but does not report the PPh withholding (no withholding slip), this is a strong indicator of non-compliance (red flag). The Auditor will use the DPP on the Input Tax Invoice as a basis to calculate the Underpaid Income Tax.
The first step in the audit procedure is to dissect the Periodic VAT Return. The Auditor does not look at the total Input VAT in aggregate but performs segregation based on transaction types:
The Auditor will download the Input Tax Invoice details and filter them:
The Auditor separates Goods Imports (PIB documents) from Utilization of JKP from Outside the Customs Area (Offshore VAT SSP). Utilization of offshore services is the main target for PPh Article 26 equalization.
Based on guidelines SE-65/PJ/2013 and SE-08/PJ/2012, here are the equalization working papers constructed by the Auditor:
The Auditor compares the Service DPP on the Input Tax Invoice with the DPP on the PPh 23/21 Withholding Slip.
Audit Logic: If PT A credits Input VAT from PT B for "Machine Maintenance Services" worth IDR 100 Million, then PT A must issue a PPh Article 23 Withholding Slip in the name of PT B with a DPP of IDR 100 Million.
Equalization Formula:
(Offshore VAT DPP) - (PPh 26 DPP on Services/Royalties) = Potential Discrepancy
In the Final Audit Discussion, the Taxpayer is given the opportunity to refute via valid variables:
Differences often arise from cash flow vs accrual recording, KMK rate date differences for PPh 26, or pure cost reimbursements that are VAT-able but not withholding objects.
Based on SE-15/PJ/2018, findings can lead to:
Data inconsistencies are hard to refute in the Coretax era without neat documentation.